Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEP68007.1 | CEP68373.1 | 2210 | 2577 | SCIFF radical SAM maturase. | Uncharacterized. | 0.621 |
CEP68373.1 | CEP68007.1 | 2577 | 2210 | Uncharacterized. | SCIFF radical SAM maturase. | 0.621 |
CEP68373.1 | CEP68374.1 | 2577 | 2578 | Uncharacterized. | RNA methyltransferase, RsmD. | 0.930 |
CEP68373.1 | CEP69437.1 | 2577 | 3517 | Uncharacterized. | PASTA. | 0.421 |
CEP68373.1 | CEP69441.1 | 2577 | 3521 | Uncharacterized. | SMAD/FHA domain. | 0.404 |
CEP68373.1 | rpmB | 2577 | 3509 | Uncharacterized. | Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.426 |
CEP68373.1 | uvrC | 2577 | 1084 | Uncharacterized. | UvrABC system, subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.421 |
CEP68374.1 | CEP68373.1 | 2578 | 2577 | RNA methyltransferase, RsmD. | Uncharacterized. | 0.930 |
CEP68374.1 | rpmB | 2578 | 3509 | RNA methyltransferase, RsmD. | Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.421 |
CEP68374.1 | uvrC | 2578 | 1084 | RNA methyltransferase, RsmD. | UvrABC system, subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.467 |
CEP69437.1 | CEP68373.1 | 3517 | 2577 | PASTA. | Uncharacterized. | 0.421 |
CEP69437.1 | CEP69441.1 | 3517 | 3521 | PASTA. | SMAD/FHA domain. | 0.998 |
CEP69441.1 | CEP68373.1 | 3521 | 2577 | SMAD/FHA domain. | Uncharacterized. | 0.404 |
CEP69441.1 | CEP69437.1 | 3521 | 3517 | SMAD/FHA domain. | PASTA. | 0.998 |
rpmB | CEP68373.1 | 3509 | 2577 | Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Uncharacterized. | 0.426 |
rpmB | CEP68374.1 | 3509 | 2578 | Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | RNA methyltransferase, RsmD. | 0.421 |
uvrC | CEP68373.1 | 1084 | 2577 | UvrABC system, subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | Uncharacterized. | 0.421 |
uvrC | CEP68374.1 | 1084 | 2578 | UvrABC system, subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | RNA methyltransferase, RsmD. | 0.467 |