STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP68609.12-hydroxyglutaryl-CoA dehydratase, D-component. (143 aa)    
Predicted Functional Partners:
CEP67397.1
ATPase, BadF/BadG/BcrA/BcrD type.
 
 0.990
CEP67398.1
2-hydroxyglutaryl-CoA dehydratase, D-component.
 
 
 0.986
CEP68608.1
Uncharacterized.
 
     0.946
CEP68939.1
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
 
    0.796
CEP68610.1
Uncharacterised protein family UPF0340; Belongs to the UPF0340 family.
       0.773
CEP68066.1
ATPase, BadF/BadG/BcrA/BcrD type.
 
 0.772
CEP68629.1
ATPase, BadF/BadG/BcrA/BcrD type.
 
 0.770
CEP68607.1
Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family.
 
    0.713
CEP66374.1
TusA-like domain; Belongs to the sulfur carrier protein TusA family.
 
    0.687
CEP68611.1
Carbohydrate kinase PfkB; Belongs to the carbohydrate kinase PfkB family.
       0.651
Your Current Organism:
Moorella glycerini
NCBI taxonomy Id: 55779
Other names: ATCC 700316, DSM 11254, M. glycerini, strain JW/AS-Y6
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