STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP69094.1Cell wall hydrolase, SleB. (138 aa)    
Predicted Functional Partners:
CEP66314.1
Spore germination YpeB.
 
  
 0.864
CEP68071.1
Stage V sporulation AD.
  
  
 0.751
CEP69501.1
Sporulation stage II, protein R.
 
   
 0.711
gpr
Peptidase A25, germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.706
CEP68387.1
Sporulation stage V, protein T.
  
   
 0.698
CEP68053.1
Sporulation protein YtfJ.
  
  
 0.680
CEP68072.1
Sporulation stage V, protein AC.
  
  
 0.646
CEP68446.1
Sporulation stage III, transcriptional regulator SpoIIID.
  
  
 0.636
CEP69502.1
RNA polymerase sigma-G type; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
    0.597
CEP68372.1
Sporulation integral membrane protein YlbJ.
  
   
 0.577
Your Current Organism:
Moorella glycerini
NCBI taxonomy Id: 55779
Other names: ATCC 700316, DSM 11254, M. glycerini, strain JW/AS-Y6
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