STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP69178.1RmlC-like jelly roll fold. (127 aa)    
Predicted Functional Partners:
CEP69177.1
Aldolase-type TIM barrel.
       0.758
CEP77326.1
Nucleotide-diphospho-sugar transferases.
  
 
 0.731
CEP67926.1
Nucleotide-diphospho-sugar transferases.
  
 
 0.731
CEP69353.1
Nucleotide-diphospho-sugar transferases.
  
 
 0.731
CEP66588.1
Nucleotidyl transferase.
  
 
 0.731
CEP69179.1
RmlC-like jelly roll fold.
       0.671
CEP69176.1
Putative cyclase.
       0.637
metG
Methionine-tRNA synthetase, type 2; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
  0.512
CEP67409.1
Lipopolysaccharide biosynthesis.
  
 
 0.492
CEP68830.1
UDP-glucose/GDP-mannose dehydrogenase.
  
 
 0.421
Your Current Organism:
Moorella glycerini
NCBI taxonomy Id: 55779
Other names: ATCC 700316, DSM 11254, M. glycerini, strain JW/AS-Y6
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