Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALM75576.1Hypothetical protein; Homologs of previously reported genes of unknown function. (125 aa)    
Predicted Functional Partners:
ALM75577.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
       0.826
ALM75578.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.703
ALM75574.1
Hypothetical protein; Homologs of previously reported genes of unknown function; with YHS domain.
       0.677
ALM75575.1
Hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.560
ALM75579.1
Peroxiredoxin; Function of strongly homologous gene; enzyme.
     
 0.420
Your Current Organism:
Thermococcus barophilus
NCBI taxonomy Id: 55802
Other names: DSM 11836, T. barophilus
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