Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KMQ66086.1Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (577 aa)    
Predicted Functional Partners:
KMQ59974.1
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.878
KMQ66087.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KMQ65830.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.768
KMQ60189.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.595
KMQ66085.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
KMQ64879.1
Peptidase S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.456
KMQ66619.1
Peptidase U61; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.445
KMQ61657.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.445
KMQ59962.1
Peptidase S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.439
KMQ66088.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
Your Current Organism:
Chryseobacterium angstadtii
NCBI taxonomy Id: 558151
Other names: ATCC BAA-2160, C. angstadtii, Chryseobacterium angstadtii Kirk et al. 2013, Chryseobacterium sp. KM, KCTC 23297, NRRL B-59516, strain KM
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