Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KMQ66088.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)    
Predicted Functional Partners:
KMQ66089.1
PspC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.827
KMQ66090.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KMQ66766.1
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.550
KMQ66429.1
Gliding motility protein GldH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
KMQ65674.1
Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.541
KMQ65687.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
KMQ66920.1
Molecular chaperone Skp; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
KMQ65364.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
KMQ66000.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
KMQ65997.1
Gliding motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
Your Current Organism:
Chryseobacterium angstadtii
NCBI taxonomy Id: 558151
Other names: ATCC BAA-2160, C. angstadtii, Chryseobacterium angstadtii Kirk et al. 2013, Chryseobacterium sp. KM, KCTC 23297, NRRL B-59516, strain KM
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