Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMQ65801.1Ferrichrome-iron receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (756 aa)    
Predicted Functional Partners:
KMQ64607.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.854
KMQ65802.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.543
KMQ65800.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
KMQ66299.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.458
KMQ59534.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.455
KMQ66498.1
Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.434
KMQ62954.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.431
KMQ64386.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.429
Your Current Organism:
Chryseobacterium angstadtii
NCBI taxonomy Id: 558151
Other names: ATCC BAA-2160, C. angstadtii, Chryseobacterium angstadtii Kirk et al. 2013, Chryseobacterium sp. KM, KCTC 23297, NRRL B-59516, strain KM
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