Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KMQ59994.1 | KMQ65129.1 | ACM46_17225 | ACM46_13155 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.862 |
| KMQ59994.1 | KMQ66766.1 | ACM46_17225 | ACM46_04480 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.816 |
| KMQ59994.1 | rpoA | ACM46_17225 | ACM46_00885 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.825 |
| KMQ59994.1 | rpoB | ACM46_17225 | ACM46_20230 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.845 |
| KMQ59994.1 | rpoC | ACM46_17225 | ACM46_20235 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.820 |
| KMQ63231.1 | KMQ65129.1 | ACM46_13925 | ACM46_13155 | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.871 |
| KMQ63231.1 | KMQ65518.1 | ACM46_13925 | ACM46_06430 | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.443 |
| KMQ65129.1 | KMQ59994.1 | ACM46_13155 | ACM46_17225 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.862 |
| KMQ65129.1 | KMQ63231.1 | ACM46_13155 | ACM46_13925 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.871 |
| KMQ65129.1 | KMQ65518.1 | ACM46_13155 | ACM46_06430 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.775 |
| KMQ65129.1 | KMQ66766.1 | ACM46_13155 | ACM46_04480 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.984 |
| KMQ65129.1 | dnaG | ACM46_13155 | ACM46_17690 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | 0.808 |
| KMQ65129.1 | lepA | ACM46_13155 | ACM46_03680 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.819 |
| KMQ65129.1 | nusA | ACM46_13155 | ACM46_01490 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.909 |
| KMQ65129.1 | rpoA | ACM46_13155 | ACM46_00885 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.994 |
| KMQ65129.1 | rpoB | ACM46_13155 | ACM46_20230 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
| KMQ65129.1 | rpoC | ACM46_13155 | ACM46_20235 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
| KMQ65518.1 | KMQ63231.1 | ACM46_06430 | ACM46_13925 | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.443 |
| KMQ65518.1 | KMQ65129.1 | ACM46_06430 | ACM46_13155 | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.775 |
| KMQ65518.1 | rpoA | ACM46_06430 | ACM46_00885 | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.449 |
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