STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMQ60252.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (1028 aa)    
Predicted Functional Partners:
KMQ64607.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.614
KMQ60251.1
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
KMQ65215.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
KMQ64804.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
KMQ64691.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.473
KMQ60254.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.470
KMQ64764.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
KMQ64803.1
Ferrichrome-iron receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.454
KMQ59359.1
Flavastacin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.445
KMQ66709.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.444
Your Current Organism:
Chryseobacterium angstadtii
NCBI taxonomy Id: 558151
Other names: ATCC BAA-2160, C. angstadtii, Chryseobacterium angstadtii Kirk et al. 2013, Chryseobacterium sp. KM, KCTC 23297, NRRL B-59516, strain KM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.