STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMQ59351.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)    
Predicted Functional Partners:
KMQ59447.1
Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.934
KMQ64614.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.812
KMQ58348.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.785
KMQ65871.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.711
KMQ64771.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.701
KMQ66009.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.692
KMQ59352.1
Antitermination protein NusB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.669
KMQ59350.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
KMQ59353.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
KMQ59354.1
Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
Your Current Organism:
Chryseobacterium angstadtii
NCBI taxonomy Id: 558151
Other names: ATCC BAA-2160, C. angstadtii, Chryseobacterium angstadtii Kirk et al. 2013, Chryseobacterium sp. KM, KCTC 23297, NRRL B-59516, strain KM
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.