STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ37_01775Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)    
Predicted Functional Partners:
GldC
Gliding motility protein GldC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
IQ37_00735
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
IQ37_16210
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.697
IQ37_07030
acyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
IQ37_01045
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.658
IQ37_00470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BshC family.
  
     0.573
IQ37_01780
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.566
IQ37_13710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
IQ37_01770
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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