STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ37_03580ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)    
Predicted Functional Partners:
AccB
acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.981
RibD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.893
IQ37_03570
Carbohydrate esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.879
IQ37_03585
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.875
IQ37_03590
Glutathione synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.863
IQ37_03600
GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.850
IQ37_03605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.825
IQ37_04790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.808
IQ37_03575
Peptidase M17; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M17 family.
 
   
 0.798
IQ37_16915
Erythronolide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.796
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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