Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IQ37_04645ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)    
Predicted Functional Partners:
IQ37_04650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.805
IQ37_04640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.804
IQ37_04625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.803
IQ37_04635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.803
IQ37_04630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
IQ37_05590
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.636
IQ37_05575
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.453
IQ37_05580
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.427
IQ37_12555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.414
IQ37_16550
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.409
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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