Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IQ37_06140Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)    
Predicted Functional Partners:
IQ37_06135
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.852
IQ37_06125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.835
IQ37_06145
Acetyltransferase; WbbJ; catalyzes the transfer of the O-acetyl moiety to the O antigen; part of the lipopolysaccharide biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.809
IQ37_06150
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.776
IQ37_01450
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
IQ37_06130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
IQ37_06100
Tyrosine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.575
IQ37_06095
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.486
IQ37_06230
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.481
IQ37_06105
Vi polysaccharide biosynthesis protein VipB/TviC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.472
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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