STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ37_07350Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (75 aa)    
Predicted Functional Partners:
IQ37_07345
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.865
IQ37_07360
Sodium:proline symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.725
IQ37_07340
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.685
IQ37_07365
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.612
IQ37_07355
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.599
IQ37_07335
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.538
IQ37_17005
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.462
IQ37_01630
Deoxyuridine 5'-triphosphate nucleotidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
prpE
Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.442
IQ37_14165
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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