Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IQ37_08035Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
IQ37_08030
Doxx family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.912
IQ37_16555
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
IQ37_05680
Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.657
IQ37_06420
Pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
IQ37_08570
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.632
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.599
IQ37_11590
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
IQ37_08025
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.584
IQ37_06080
Recombinase RecX; Modulates RecA activity; Belongs to the RecX family.
  
     0.583
IQ37_08845
Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.572
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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