Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IQ37_09610acyl-CoA:6-aminopenicillanic acid acyl-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)    
Predicted Functional Partners:
IQ37_09605
All-trans-retinol 13,14-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.912
IQ37_09600
Lipid A biosynthesis acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.872
IQ37_09595
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.862
IQ37_13575
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
IQ37_13485
3-hydroxyacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.819
IQ37_13495
Cell envelope biogenesis protein LolA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.819
IQ37_13505
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.819
IQ37_09575
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.818
IQ37_13475
B-glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.811
IQ37_13490
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.811
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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