STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ37_11430Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)    
Predicted Functional Partners:
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
    0.758
IQ37_16385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
IQ37_07990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
IQ37_00225
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
IQ37_14280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
IQ37_04270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.670
IQ37_04100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.665
IQ37_08270
Molecular chaperone Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.662
IQ37_11510
Prenyltransferase UbiA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.652
IQ37_16090
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.640
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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