Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IQ37_13890Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)    
Predicted Functional Partners:
IQ37_18960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
IQ37_13895
Glutamine cyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
IQ37_02980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.592
IQ37_10920
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.567
IQ37_13885
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.565
IQ37_13980
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
IQ37_13000
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.544
IQ37_13880
Sodium:hydrogen antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
  
    0.507
IQ37_02415
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.474
icmF
Cobalamin-binding protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
  
 0.465
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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