Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IQ37_14165Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)    
Predicted Functional Partners:
IQ37_14155
Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.689
FolB
Diguanylate cyclase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.689
IQ37_14170
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
thrB
Serine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
       0.616
IQ37_14145
Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.600
IQ37_04665
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
IQ37_18850
Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.496
IQ37_09365
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
IQ37_17540
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
IQ37_00090
ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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