Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IQ37_14850Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (976 aa)    
Predicted Functional Partners:
IQ37_05330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.560
SprA
Gliding motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.560
IQ37_12330
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.505
IQ37_17715
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.499
IQ37_14865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.491
IQ37_14840
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.473
IQ37_19020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
IQ37_06415
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.445
IQ37_18125
PorT protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.444
IQ37_13750
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.434
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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