STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ37_15340Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (765 aa)    
Predicted Functional Partners:
IQ37_15350
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.795
IQ37_15345
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.786
IQ37_17010
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.735
IQ37_17005
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.702
IQ37_02180
Metallophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.609
nuoN
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
       0.583
IQ37_12460
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.562
IQ37_04960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
IQ37_00845
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.547
IQ37_05260
Organic hydroperoxide resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.547
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.