STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SprAGliding motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2366 aa)    
Predicted Functional Partners:
IQ37_05330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.997
IQ37_14060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.996
IQ37_04255
Gliding motility protein GldL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.894
GldK
Gliding motility protein Gldk; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.880
ruvA
ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
  
  
 0.872
IQ37_04250
Gliding motility protein GldM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.847
GldJ
Gliding motility protein GldJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.837
IQ37_18125
PorT protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.833
IQ37_16730
Gliding motility protein GldB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.831
GldD
Gliding motility protein GldD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.793
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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