STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQ37_16640Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)    
Predicted Functional Partners:
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.786
IQ37_00370
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
IQ37_01170
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
IQ37_10560
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
IQ37_13625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.747
IQ37_08455
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
IQ37_18130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
IQ37_08450
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.724
IQ37_10585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.720
IQ37_04310
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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