Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IQ37_16975Alpha-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1284 aa)    
Predicted Functional Partners:
IQ37_02380
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.607
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
   
   0.482
IQ37_10885
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.481
IQ37_12745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.442
IQ37_07085
Nucleotide pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.432
IQ37_10655
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.432
IQ37_11655
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.432
IQ37_16765
Nucleotide pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.432
PutP
Proline:sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.418
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.