STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MgtAMagnesium ABC transporter ATPase; P-type; involved in magnesium transport into the cytoplasm; Derived by automated computational analysis using gene prediction method: Protein Homology. (887 aa)    
Predicted Functional Partners:
IQ37_17105
Magnesium transporter MgtC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.800
IQ37_18780
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.733
IQ37_04735
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.636
IQ37_17085
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.574
IQ37_05115
Magnesium transporter MgtC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.560
IQ37_05150
Magnesium transporter MgtC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.560
IQ37_11105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.560
IQ37_04790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.553
atpE
ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.516
IQ37_17090
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
    0.510
Your Current Organism:
Chryseobacterium piperi
NCBI taxonomy Id: 558152
Other names: C. piperi, CCUG 57707, Chryseobacterium piperi Strahan et al. 2011 emend. Hahnke et al. 2016, Chryseobacterium sp. CTM, DSM 22249, JCM 15960, KCTC 23267, strain CTM
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