Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI29752.1 | SHI29768.1 | SAMN04487911_1014 | SAMN04487911_1015 | Type IX secretion system membrane protein, PorP/SprF family. | C-terminal domain of CHU protein family protein. | 0.952 |
SHI29752.1 | SHI29790.1 | SAMN04487911_1014 | SAMN04487911_1016 | Type IX secretion system membrane protein, PorP/SprF family. | Hypothetical protein. | 0.571 |
SHI29768.1 | SHI29752.1 | SAMN04487911_1015 | SAMN04487911_1014 | C-terminal domain of CHU protein family protein. | Type IX secretion system membrane protein, PorP/SprF family. | 0.952 |
SHI29768.1 | SHI29790.1 | SAMN04487911_1015 | SAMN04487911_1016 | C-terminal domain of CHU protein family protein. | Hypothetical protein. | 0.571 |
SHI29790.1 | SHI29752.1 | SAMN04487911_1016 | SAMN04487911_1014 | Hypothetical protein. | Type IX secretion system membrane protein, PorP/SprF family. | 0.571 |
SHI29790.1 | SHI29768.1 | SAMN04487911_1016 | SAMN04487911_1015 | Hypothetical protein. | C-terminal domain of CHU protein family protein. | 0.571 |
SHI29790.1 | glnS | SAMN04487911_1016 | SAMN04487911_1017 | Hypothetical protein. | glutaminyl-tRNA synthetase. | 0.476 |
glnS | SHI29790.1 | SAMN04487911_1017 | SAMN04487911_1016 | glutaminyl-tRNA synthetase. | Hypothetical protein. | 0.476 |