Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI41359.1 | SHI41403.1 | SAMN04487911_1021 | SAMN04487911_1022 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.702 |
SHI41359.1 | SHI41441.1 | SAMN04487911_1021 | SAMN04487911_1023 | Hypothetical protein. | SusD family protein. | 0.699 |
SHI41359.1 | SHI79822.1 | SAMN04487911_1021 | SAMN04487911_1061 | Hypothetical protein. | Tat (twin-arginine translocation) pathway signal sequence. | 0.760 |
SHI41359.1 | SHI80008.1 | SAMN04487911_1021 | SAMN04487911_1067 | Hypothetical protein. | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | 0.400 |
SHI41359.1 | SHJ88903.1 | SAMN04487911_1021 | SAMN04487911_15113 | Hypothetical protein. | Tat (twin-arginine translocation) pathway signal sequence. | 0.960 |
SHI41359.1 | SHJ91120.1 | SAMN04487911_1021 | SAMN04487911_1565 | Hypothetical protein. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.959 |
SHI41403.1 | SHI41359.1 | SAMN04487911_1022 | SAMN04487911_1021 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.702 |
SHI41403.1 | SHI41441.1 | SAMN04487911_1022 | SAMN04487911_1023 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.961 |
SHI41441.1 | SHI41359.1 | SAMN04487911_1023 | SAMN04487911_1021 | SusD family protein. | Hypothetical protein. | 0.699 |
SHI41441.1 | SHI41403.1 | SAMN04487911_1023 | SAMN04487911_1022 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.961 |
SHI79822.1 | SHI41359.1 | SAMN04487911_1061 | SAMN04487911_1021 | Tat (twin-arginine translocation) pathway signal sequence. | Hypothetical protein. | 0.760 |
SHI79822.1 | SHI80008.1 | SAMN04487911_1061 | SAMN04487911_1067 | Tat (twin-arginine translocation) pathway signal sequence. | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | 0.471 |
SHI80008.1 | SHI41359.1 | SAMN04487911_1067 | SAMN04487911_1021 | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | Hypothetical protein. | 0.400 |
SHI80008.1 | SHI79822.1 | SAMN04487911_1067 | SAMN04487911_1061 | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | Tat (twin-arginine translocation) pathway signal sequence. | 0.471 |
SHI80008.1 | SHJ88903.1 | SAMN04487911_1067 | SAMN04487911_15113 | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | Tat (twin-arginine translocation) pathway signal sequence. | 0.400 |
SHI80008.1 | SHJ91120.1 | SAMN04487911_1067 | SAMN04487911_1565 | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.400 |
SHJ88903.1 | SHI41359.1 | SAMN04487911_15113 | SAMN04487911_1021 | Tat (twin-arginine translocation) pathway signal sequence. | Hypothetical protein. | 0.960 |
SHJ88903.1 | SHI80008.1 | SAMN04487911_15113 | SAMN04487911_1067 | Tat (twin-arginine translocation) pathway signal sequence. | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | 0.400 |
SHJ91120.1 | SHI41359.1 | SAMN04487911_1565 | SAMN04487911_1021 | Oxidoreductase family, NAD-binding Rossmann fold. | Hypothetical protein. | 0.959 |
SHJ91120.1 | SHI80008.1 | SAMN04487911_1565 | SAMN04487911_1067 | Oxidoreductase family, NAD-binding Rossmann fold. | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | 0.400 |