STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI66841.1Putative DNA-binding domain-containing protein. (378 aa)    
Predicted Functional Partners:
SHI66799.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.825
SHI43806.1
Hypothetical protein.
  
     0.760
SHJ31591.1
Hypothetical protein.
  
     0.758
SHI84364.1
CarboxypepD_reg-like domain-containing protein.
  
    0.752
SHI83948.1
Protein of unknown function.
  
     0.751
SHJ09766.1
Aspartyl protease.
  
     0.749
SHI83907.1
Protein of unknown function.
  
     0.748
SHJ54269.1
Hypothetical protein.
  
    0.745
SHI31295.1
Hypothetical protein.
  
     0.744
SHI83004.1
Hypothetical protein.
  
     0.744
Your Current Organism:
Arenibacter nanhaiticus
NCBI taxonomy Id: 558155
Other names: A. nanhaiticus, Arenibacter nanhaiticus Sun et al. 2010, Arenibacter sp. NH36A, CCTCC AB 208315, LMG 24842, LMG:24842, MCCC 1A04137, strain NH36A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.