Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI63205.1 | SHI63245.1 | SAMN04487911_10418 | SAMN04487911_10419 | Hypothetical protein. | Hypothetical protein. | 0.879 |
SHI63205.1 | SHI63279.1 | SAMN04487911_10418 | SAMN04487911_10420 | Hypothetical protein. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.870 |
SHI63205.1 | SHI94835.1 | SAMN04487911_10418 | SAMN04487911_10859 | Hypothetical protein. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.777 |
SHI63205.1 | SHJ38944.1 | SAMN04487911_10418 | SAMN04487911_11951 | Hypothetical protein. | Hypothetical protein. | 0.435 |
SHI63245.1 | SHI63205.1 | SAMN04487911_10419 | SAMN04487911_10418 | Hypothetical protein. | Hypothetical protein. | 0.879 |
SHI63245.1 | SHI63279.1 | SAMN04487911_10419 | SAMN04487911_10420 | Hypothetical protein. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.940 |
SHI63245.1 | SHI94835.1 | SAMN04487911_10419 | SAMN04487911_10859 | Hypothetical protein. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.797 |
SHI63245.1 | SHJ14342.1 | SAMN04487911_10419 | SAMN04487911_11230 | Hypothetical protein. | SusD family protein. | 0.465 |
SHI63245.1 | SHJ14375.1 | SAMN04487911_10419 | SAMN04487911_11231 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.424 |
SHI63245.1 | SHJ38944.1 | SAMN04487911_10419 | SAMN04487911_11951 | Hypothetical protein. | Hypothetical protein. | 0.523 |
SHI63279.1 | SHI63205.1 | SAMN04487911_10420 | SAMN04487911_10418 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Hypothetical protein. | 0.870 |
SHI63279.1 | SHI63245.1 | SAMN04487911_10420 | SAMN04487911_10419 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Hypothetical protein. | 0.940 |
SHI94835.1 | SHI63205.1 | SAMN04487911_10859 | SAMN04487911_10418 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Hypothetical protein. | 0.777 |
SHI94835.1 | SHI63245.1 | SAMN04487911_10859 | SAMN04487911_10419 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Hypothetical protein. | 0.797 |
SHI94835.1 | SHJ14375.1 | SAMN04487911_10859 | SAMN04487911_11231 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | TonB-linked outer membrane protein, SusC/RagA family. | 0.412 |
SHJ14342.1 | SHI63245.1 | SAMN04487911_11230 | SAMN04487911_10419 | SusD family protein. | Hypothetical protein. | 0.465 |
SHJ14342.1 | SHJ14375.1 | SAMN04487911_11230 | SAMN04487911_11231 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.933 |
SHJ14342.1 | SHJ38944.1 | SAMN04487911_11230 | SAMN04487911_11951 | SusD family protein. | Hypothetical protein. | 0.535 |
SHJ14375.1 | SHI63245.1 | SAMN04487911_11231 | SAMN04487911_10419 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.424 |
SHJ14375.1 | SHI94835.1 | SAMN04487911_11231 | SAMN04487911_10859 | TonB-linked outer membrane protein, SusC/RagA family. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.412 |
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