Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI34484.1 | SHI82221.1 | SAMN04487911_101182 | SAMN04487911_10679 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acyl-CoA dehydrogenase. | 0.944 |
SHI34484.1 | SHI82286.1 | SAMN04487911_101182 | SAMN04487911_10681 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.920 |
SHI34484.1 | SHI82500.1 | SAMN04487911_101182 | SAMN04487911_10688 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | butyryl-CoA dehydrogenase. | 0.894 |
SHI34484.1 | fabV | SAMN04487911_101182 | SAMN04487911_107112 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+); Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. | 0.877 |
SHI34484.1 | lpxC | SAMN04487911_101182 | SAMN04487911_109119 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.404 |
SHI65900.1 | SHI82286.1 | SAMN04487911_10497 | SAMN04487911_10681 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-hydroxyacyl-CoA dehydrogenase. | 0.522 |
SHI65900.1 | SHJ05668.1 | SAMN04487911_10497 | SAMN04487911_11052 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.802 |
SHI65900.1 | SHJ05700.1 | SAMN04487911_10497 | SAMN04487911_11053 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.806 |
SHI65900.1 | SHJ53384.1 | SAMN04487911_10497 | SAMN04487911_12430 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.935 |
SHI65900.1 | fabV | SAMN04487911_10497 | SAMN04487911_107112 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+); Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. | 0.797 |
SHI65900.1 | lpxC | SAMN04487911_10497 | SAMN04487911_109119 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.924 |
SHI82221.1 | SHI34484.1 | SAMN04487911_10679 | SAMN04487911_101182 | Acyl-CoA dehydrogenase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.944 |
SHI82221.1 | SHI82286.1 | SAMN04487911_10679 | SAMN04487911_10681 | Acyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.997 |
SHI82221.1 | fabV | SAMN04487911_10679 | SAMN04487911_107112 | Acyl-CoA dehydrogenase. | Enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+); Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. | 0.669 |
SHI82286.1 | SHI34484.1 | SAMN04487911_10681 | SAMN04487911_101182 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.920 |
SHI82286.1 | SHI65900.1 | SAMN04487911_10681 | SAMN04487911_10497 | 3-hydroxyacyl-CoA dehydrogenase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.522 |
SHI82286.1 | SHI82221.1 | SAMN04487911_10681 | SAMN04487911_10679 | 3-hydroxyacyl-CoA dehydrogenase. | Acyl-CoA dehydrogenase. | 0.997 |
SHI82286.1 | SHI82500.1 | SAMN04487911_10681 | SAMN04487911_10688 | 3-hydroxyacyl-CoA dehydrogenase. | butyryl-CoA dehydrogenase. | 0.990 |
SHI82286.1 | SHJ05668.1 | SAMN04487911_10681 | SAMN04487911_11052 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.505 |
SHI82286.1 | SHJ05700.1 | SAMN04487911_10681 | SAMN04487911_11053 | 3-hydroxyacyl-CoA dehydrogenase. | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.522 |
page 1 of 4