Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI59349.1 | SHI91113.1 | SAMN04487911_103174 | SAMN04487911_107123 | Winged helix-turn helix. | Hypothetical protein. | 0.774 |
SHI91076.1 | SHI91113.1 | SAMN04487911_107122 | SAMN04487911_107123 | ABC-2 family transporter protein. | Hypothetical protein. | 0.491 |
SHI91113.1 | SHI59349.1 | SAMN04487911_107123 | SAMN04487911_103174 | Hypothetical protein. | Winged helix-turn helix. | 0.774 |
SHI91113.1 | SHI91076.1 | SAMN04487911_107123 | SAMN04487911_107122 | Hypothetical protein. | ABC-2 family transporter protein. | 0.491 |
SHI91113.1 | SHJ40147.1 | SAMN04487911_107123 | SAMN04487911_1201 | Hypothetical protein. | Winged helix-turn helix. | 0.774 |
SHI91113.1 | SHJ69288.1 | SAMN04487911_107123 | SAMN04487911_1311 | Hypothetical protein. | Winged helix-turn helix. | 0.774 |
SHI91113.1 | SHJ91330.1 | SAMN04487911_107123 | SAMN04487911_1571 | Hypothetical protein. | Winged helix-turn helix. | 0.774 |
SHI91113.1 | SHJ92806.1 | SAMN04487911_107123 | SAMN04487911_1607 | Hypothetical protein. | Winged helix-turn helix. | 0.774 |
SHJ40147.1 | SHI91113.1 | SAMN04487911_1201 | SAMN04487911_107123 | Winged helix-turn helix. | Hypothetical protein. | 0.774 |
SHJ69288.1 | SHI91113.1 | SAMN04487911_1311 | SAMN04487911_107123 | Winged helix-turn helix. | Hypothetical protein. | 0.774 |
SHJ91330.1 | SHI91113.1 | SAMN04487911_1571 | SAMN04487911_107123 | Winged helix-turn helix. | Hypothetical protein. | 0.774 |
SHJ92806.1 | SHI91113.1 | SAMN04487911_1607 | SAMN04487911_107123 | Winged helix-turn helix. | Hypothetical protein. | 0.774 |