Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI49425.1 | SHJ12060.1 | SAMN04487911_102242 | SAMN04487911_11193 | cation:H+ antiporter. | Small conductance mechanosensitive channel. | 0.409 |
SHI49425.1 | SHJ74980.1 | SAMN04487911_102242 | SAMN04487911_13414 | cation:H+ antiporter. | NhaP-type Na+/H+ or K+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.616 |
SHI82083.1 | SHJ12060.1 | SAMN04487911_10675 | SAMN04487911_11193 | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | Small conductance mechanosensitive channel. | 0.405 |
SHJ12060.1 | SHI49425.1 | SAMN04487911_11193 | SAMN04487911_102242 | Small conductance mechanosensitive channel. | cation:H+ antiporter. | 0.409 |
SHJ12060.1 | SHI82083.1 | SAMN04487911_11193 | SAMN04487911_10675 | Small conductance mechanosensitive channel. | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | 0.405 |
SHJ12060.1 | SHJ12088.1 | SAMN04487911_11193 | SAMN04487911_11194 | Small conductance mechanosensitive channel. | Hypothetical protein. | 0.475 |
SHJ12060.1 | SHJ71666.1 | SAMN04487911_11193 | SAMN04487911_13214 | Small conductance mechanosensitive channel. | SSU ribosomal protein S6P modification protein. | 0.481 |
SHJ12060.1 | SHJ74980.1 | SAMN04487911_11193 | SAMN04487911_13414 | Small conductance mechanosensitive channel. | NhaP-type Na+/H+ or K+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.456 |
SHJ12060.1 | gcvP | SAMN04487911_11193 | SAMN04487911_10735 | Small conductance mechanosensitive channel. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.510 |
SHJ12088.1 | SHJ12060.1 | SAMN04487911_11194 | SAMN04487911_11193 | Hypothetical protein. | Small conductance mechanosensitive channel. | 0.475 |
SHJ71666.1 | SHJ12060.1 | SAMN04487911_13214 | SAMN04487911_11193 | SSU ribosomal protein S6P modification protein. | Small conductance mechanosensitive channel. | 0.481 |
SHJ74980.1 | SHI49425.1 | SAMN04487911_13414 | SAMN04487911_102242 | NhaP-type Na+/H+ or K+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | cation:H+ antiporter. | 0.616 |
SHJ74980.1 | SHJ12060.1 | SAMN04487911_13414 | SAMN04487911_11193 | NhaP-type Na+/H+ or K+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Small conductance mechanosensitive channel. | 0.456 |
gcvP | SHJ12060.1 | SAMN04487911_10735 | SAMN04487911_11193 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Small conductance mechanosensitive channel. | 0.510 |