STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ15013.1Cu-processing system permease protein. (271 aa)    
Predicted Functional Partners:
SHJ15126.1
Copper chaperone NosL.
 
 
 0.988
SHJ15071.1
Nitrous oxidase accessory protein.
 
 
 0.987
SHJ15044.1
Cu-processing system ATP-binding protein.
 
  0.981
SHJ15155.1
Hypothetical protein.
 
 
 0.980
SHJ15185.1
Nitrous oxide reductase apoprotein.
 
 
 0.958
SHJ14985.1
Hypothetical protein.
 
     0.917
SHJ15239.1
Cytochrome c, mono-and diheme variants.
 
     0.873
SHJ15098.1
Hypothetical protein.
       0.785
SHI67558.1
Cytochrome c, mono-and diheme variants.
 
     0.753
SHJ14839.1
Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
     0.702
Your Current Organism:
Arenibacter nanhaiticus
NCBI taxonomy Id: 558155
Other names: A. nanhaiticus, Arenibacter nanhaiticus Sun et al. 2010, Arenibacter sp. NH36A, CCTCC AB 208315, LMG 24842, LMG:24842, MCCC 1A04137, strain NH36A
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