Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI67558.1 | SHJ14839.1 | SAMN04487911_104143 | SAMN04487911_11245 | Cytochrome c, mono-and diheme variants. | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.519 |
SHI67558.1 | SHJ14985.1 | SAMN04487911_104143 | SAMN04487911_11250 | Cytochrome c, mono-and diheme variants. | Hypothetical protein. | 0.634 |
SHI67558.1 | SHJ15013.1 | SAMN04487911_104143 | SAMN04487911_11251 | Cytochrome c, mono-and diheme variants. | Cu-processing system permease protein. | 0.753 |
SHI67558.1 | SHJ15044.1 | SAMN04487911_104143 | SAMN04487911_11252 | Cytochrome c, mono-and diheme variants. | Cu-processing system ATP-binding protein. | 0.617 |
SHI67558.1 | SHJ15071.1 | SAMN04487911_104143 | SAMN04487911_11253 | Cytochrome c, mono-and diheme variants. | Nitrous oxidase accessory protein. | 0.753 |
SHI67558.1 | SHJ15126.1 | SAMN04487911_104143 | SAMN04487911_11255 | Cytochrome c, mono-and diheme variants. | Copper chaperone NosL. | 0.749 |
SHI67558.1 | SHJ15155.1 | SAMN04487911_104143 | SAMN04487911_11256 | Cytochrome c, mono-and diheme variants. | Hypothetical protein. | 0.748 |
SHI67558.1 | SHJ15185.1 | SAMN04487911_104143 | SAMN04487911_11257 | Cytochrome c, mono-and diheme variants. | Nitrous oxide reductase apoprotein. | 0.815 |
SHJ14839.1 | SHI67558.1 | SAMN04487911_11245 | SAMN04487911_104143 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Cytochrome c, mono-and diheme variants. | 0.519 |
SHJ14839.1 | SHJ14985.1 | SAMN04487911_11245 | SAMN04487911_11250 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Hypothetical protein. | 0.749 |
SHJ14839.1 | SHJ15013.1 | SAMN04487911_11245 | SAMN04487911_11251 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Cu-processing system permease protein. | 0.702 |
SHJ14839.1 | SHJ15044.1 | SAMN04487911_11245 | SAMN04487911_11252 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Cu-processing system ATP-binding protein. | 0.555 |
SHJ14839.1 | SHJ15071.1 | SAMN04487911_11245 | SAMN04487911_11253 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Nitrous oxidase accessory protein. | 0.711 |
SHJ14839.1 | SHJ15126.1 | SAMN04487911_11245 | SAMN04487911_11255 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Copper chaperone NosL. | 0.693 |
SHJ14839.1 | SHJ15155.1 | SAMN04487911_11245 | SAMN04487911_11256 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Hypothetical protein. | 0.706 |
SHJ14839.1 | SHJ15185.1 | SAMN04487911_11245 | SAMN04487911_11257 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Nitrous oxide reductase apoprotein. | 0.732 |
SHJ14839.1 | SHJ15239.1 | SAMN04487911_11245 | SAMN04487911_11259 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Cytochrome c, mono-and diheme variants. | 0.610 |
SHJ14985.1 | SHI67558.1 | SAMN04487911_11250 | SAMN04487911_104143 | Hypothetical protein. | Cytochrome c, mono-and diheme variants. | 0.634 |
SHJ14985.1 | SHJ14839.1 | SAMN04487911_11250 | SAMN04487911_11245 | Hypothetical protein. | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.749 |
SHJ14985.1 | SHJ15013.1 | SAMN04487911_11250 | SAMN04487911_11251 | Hypothetical protein. | Cu-processing system permease protein. | 0.917 |
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