STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ15266.1Biotin-requiring enzyme. (159 aa)    
Predicted Functional Partners:
SHJ15324.1
propionyl-CoA carboxylase beta chain.
 
 0.992
SHI75953.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 0.954
SHI64463.1
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.910
SHI76465.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 0.882
SHJ05304.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.882
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.836
SHI82286.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.835
SHJ11394.1
Allosteric NADP-dependent malic enzyme.
  
 
 0.818
SHJ41456.1
methylmalonyl-CoA mutase.
  
 
 0.811
SHJ15297.1
propionyl-CoA carboxylase alpha chain.
 
     0.800
Your Current Organism:
Arenibacter nanhaiticus
NCBI taxonomy Id: 558155
Other names: A. nanhaiticus, Arenibacter nanhaiticus Sun et al. 2010, Arenibacter sp. NH36A, CCTCC AB 208315, LMG 24842, LMG:24842, MCCC 1A04137, strain NH36A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.