STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ15723.1Predicted dehydrogenase. (324 aa)    
Predicted Functional Partners:
SHJ15751.1
Nucleoside-diphosphate-sugar epimerase.
 
    0.932
SHJ15786.1
Threonine dehydrogenase.
 
 
  0.902
SHJ15817.1
Predicted dehydrogenase.
 
    
0.751
SHJ15691.1
Putative membrane-bound dehydrogenase domain-containing protein.
       0.726
SHI75912.1
Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.719
SHJ15856.1
Xylose isomerase-like TIM barrel.
 
    0.670
SHI95772.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
     0.610
SHJ55874.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
     0.600
SHJ15951.1
D-psicose/D-tagatose/L-ribulose 3-epimerase.
 
    0.523
SHJ34531.1
Predicted dehydrogenase.
  
     0.466
Your Current Organism:
Arenibacter nanhaiticus
NCBI taxonomy Id: 558155
Other names: A. nanhaiticus, Arenibacter nanhaiticus Sun et al. 2010, Arenibacter sp. NH36A, CCTCC AB 208315, LMG 24842, LMG:24842, MCCC 1A04137, strain NH36A
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