STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ38252.1Acetyl esterase/lipase. (289 aa)    
Predicted Functional Partners:
SHI62727.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
  0.918
SHI72783.1
4Fe-4S dicluster domain-containing protein.
   
   0.885
SHJ11394.1
Allosteric NADP-dependent malic enzyme.
    
  0.816
SHJ10987.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
    
  0.815
SHI66081.1
NAD dependent epimerase/dehydratase family protein.
  
   0.810
SHI90474.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
   0.810
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.807
SHJ05726.1
Acyl carrier protein.
   
 0.807
SHI75992.1
O-succinylbenzoic acid--CoA ligase.
  
 0.783
SHI94776.1
Zinc protease; Belongs to the peptidase M16 family.
    
 
 0.757
Your Current Organism:
Arenibacter nanhaiticus
NCBI taxonomy Id: 558155
Other names: A. nanhaiticus, Arenibacter nanhaiticus Sun et al. 2010, Arenibacter sp. NH36A, CCTCC AB 208315, LMG 24842, LMG:24842, MCCC 1A04137, strain NH36A
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