STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ47032.1Two component regulator propeller. (1341 aa)    
Predicted Functional Partners:
SHI42247.1
PAS/PAC sensor hybrid histidine kinase.
 
0.999
SHI77212.1
PAS domain S-box-containing protein.
 
0.999
SHJ07037.1
PAS domain S-box-containing protein.
   
 0.999
SHJ27308.1
Signal transduction histidine kinase.
 
0.999
SHJ44330.1
PAS domain S-box-containing protein.
 
0.999
SHJ44894.1
PAS domain S-box-containing protein.
   
0.999
SHJ47547.1
Signal transduction histidine kinase.
 
0.999
SHJ56988.1
Signal transduction histidine kinase.
 
0.999
SHJ60661.1
PAS domain S-box-containing protein.
 
0.999
SHJ76656.1
PAS domain S-box-containing protein.
   
0.999
Your Current Organism:
Arenibacter nanhaiticus
NCBI taxonomy Id: 558155
Other names: A. nanhaiticus, Arenibacter nanhaiticus Sun et al. 2010, Arenibacter sp. NH36A, CCTCC AB 208315, LMG 24842, LMG:24842, MCCC 1A04137, strain NH36A
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