STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ83062.1Fibronectin type III domain-containing protein. (1048 aa)    
Predicted Functional Partners:
SHJ83174.1
Hypothetical protein.
 
  
  0.828
SHJ83152.1
Hypothetical protein.
 
     0.826
SHJ83197.1
Por secretion system C-terminal sorting domain-containing protein.
 
    0.807
SHJ94175.1
Hypothetical protein.
 
     0.786
SHI80561.1
Hypothetical protein.
  
     0.652
SHI83210.1
Hypothetical protein.
  
     0.595
SHJ25367.1
Hypothetical protein.
  
    0.585
SHJ70593.1
Hypothetical protein.
  
 
 0.537
SHJ83086.1
Hypothetical protein.
       0.524
SHJ25307.1
Hypothetical protein.
 
     0.513
Your Current Organism:
Arenibacter nanhaiticus
NCBI taxonomy Id: 558155
Other names: A. nanhaiticus, Arenibacter nanhaiticus Sun et al. 2010, Arenibacter sp. NH36A, CCTCC AB 208315, LMG 24842, LMG:24842, MCCC 1A04137, strain NH36A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.