STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000224785_01288Unannotated protein. (326 aa)    
Predicted Functional Partners:
GCA_000224785_02740
Unannotated protein.
  
 0.980
GCA_000224785_03762
Unannotated protein.
   
  0.946
GCA_000224785_01959
Unannotated protein.
   
  0.934
GCA_000224785_03787
Unannotated protein.
  
 0.933
GCA_000224785_03770
Unannotated protein.
   
  0.932
GCA_000224785_01994
Unannotated protein.
  
 0.929
GCA_000224785_01167
Unannotated protein.
   
 0.926
GCA_000224785_01977
Unannotated protein.
   
  0.926
GCA_000224785_03752
Unannotated protein.
  
  0.923
GCA_000224785_03779
Unannotated protein.
   
 0.923
Your Current Organism:
Lentibacillus jeotgali
NCBI taxonomy Id: 558169
Other names: JCM 15795, KCTC 13300, L. jeotgali, Lentibacillus jeotgali Jung et al. 2010, Lentibacillus sp. Grbi, strain Grbi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.