STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000224785_03115Unannotated protein. (452 aa)    
Predicted Functional Partners:
GCA_000224785_03111
Unannotated protein.
 
  
 0.839
GCA_000224785_03110
Unannotated protein.
 
  
 0.769
GCA_000224785_03113
Unannotated protein.
     
 0.677
GCA_000224785_03112
Unannotated protein.
  
  
 0.640
GCA_000224785_03114
Unannotated protein.
       0.628
GCA_000224785_00753
Unannotated protein.
 
  
 0.550
GCA_000224785_03116
Unannotated protein.
       0.516
GCA_000224785_02483
Unannotated protein.
 
  
 0.479
GCA_000224785_00523
Unannotated protein.
  
  
 0.412
Your Current Organism:
Lentibacillus jeotgali
NCBI taxonomy Id: 558169
Other names: JCM 15795, KCTC 13300, L. jeotgali, Lentibacillus jeotgali Jung et al. 2010, Lentibacillus sp. Grbi, strain Grbi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.