Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
AIT59906.1Multidrug RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (779 aa)    
Predicted Functional Partners:
AIT59905.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.848
AIT61996.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.642
AIT59907.1
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
AIT59908.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
AIT62122.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.525
AIT59909.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.497
AIT59913.1
Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.459
AIT61541.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.426
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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