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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT59992.1Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)    
Predicted Functional Partners:
AIT59990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.869
AIT59991.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.835
AIT59993.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
AIT59994.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
AIT59989.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.755
AIT62130.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.594
AIT59995.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.536
AIT60135.1
Septum site determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.433
AIT60306.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
AIT61982.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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