| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIT62160.1 | AIT62208.1 | CDOO_01545 | CDOO_02730 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.477 |
| AIT62160.1 | rplM | CDOO_01545 | CDOO_03095 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.468 |
| AIT62160.1 | rplN | CDOO_01545 | CDOO_02885 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.471 |
| AIT62160.1 | rplR | CDOO_01545 | CDOO_02965 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.477 |
| AIT62160.1 | rpmF | CDOO_01545 | CDOO_04310 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. | 0.473 |
| AIT62160.1 | rpsB | CDOO_01545 | CDOO_08875 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. | 0.482 |
| AIT62160.1 | rpsD | CDOO_01545 | CDOO_03020 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.473 |
| AIT62160.1 | rpsF | CDOO_01545 | CDOO_12935 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.534 |
| AIT62160.1 | rpsL | CDOO_01545 | CDOO_02760 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.484 |
| AIT62160.1 | rpsN | CDOO_01545 | CDOO_04275 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.490 |
| AIT62208.1 | AIT62160.1 | CDOO_02730 | CDOO_01545 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.477 |
| rplM | AIT62160.1 | CDOO_03095 | CDOO_01545 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.468 |
| rplM | rplN | CDOO_03095 | CDOO_02885 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
| rplM | rplR | CDOO_03095 | CDOO_02965 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
| rplM | rpmF | CDOO_03095 | CDOO_04310 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. | 0.989 |
| rplM | rpsB | CDOO_03095 | CDOO_08875 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. | 0.996 |
| rplM | rpsD | CDOO_03095 | CDOO_03020 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
| rplM | rpsF | CDOO_03095 | CDOO_12935 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
| rplM | rpsL | CDOO_03095 | CDOO_02760 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
| rplM | rpsN | CDOO_03095 | CDOO_04275 | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.991 |
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