STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT60251.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)    
Predicted Functional Partners:
AIT60252.1
Sulfate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.959
AIT60253.1
AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.863
AIT60250.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AIT61996.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.547
AIT61128.1
Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.502
AIT62200.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.498
AIT60254.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.498
AIT61892.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.489
AIT61891.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.485
AIT62240.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  
 0.433
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.