STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT60605.1Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)    
Predicted Functional Partners:
AIT61996.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.968
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.794
AIT60604.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.636
AIT60606.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.536
AIT60731.1
Phenol 2-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.522
AIT61666.1
Catalyzes the formation of protocatechuate from 4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.522
AIT60492.1
Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.493
AIT62009.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.493
AIT62012.1
Phospholipid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.493
AIT62241.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.475
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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