STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT62246.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (382 aa)    
Predicted Functional Partners:
AIT60632.1
Nucleotide pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.686
AIT61566.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
AIT61408.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
AIT60911.1
DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.567
AIT60523.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
AIT60057.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.544
AIT61867.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.542
AIT61990.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
AIT60562.1
Flagellar basal body P-ring biosynthesis protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
AIT60629.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
       0.515
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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