STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIT60758.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)    
Predicted Functional Partners:
AIT60759.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.670
AIT60760.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
AIT60761.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
AIT60762.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
AIT60763.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
mltG
ABC transporter substrate-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
   
    0.517
AIT60764.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.460
AIT61187.1
Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.446
AIT61932.1
MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
      
 0.410
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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