Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
AIT60877.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
AIT60878.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.825
AIT62266.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
AIT60879.1
DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.696
AIT60880.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.539
AIT59977.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
AIT61993.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
AIT61374.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
AIT60810.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
AIT61859.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.455
AIT60118.1
Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Corynebacterium doosanense
NCBI taxonomy Id: 558173
Other names: C. doosanense CAU 212 = DSM 45436, Corynebacterium doosanense CAU 212, Corynebacterium doosanense CAU 212 = DSM 45436, Corynebacterium doosanense DSM 45436, Corynebacterium doosanense DSM 45436 = CAU 212, Corynebacterium sp. CAU 212
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